If anyone would like me to test an alternate setup on my mac (other than macports). I can send you (off list) a zip file with an Xcode project set up to work when OpenMPI is installed in that directory.ĭo not post admin requests to the list. First small win on Xcode 5 and OS-X 10.9: sudo port install openmpi +gcc48. If you're not familiar with Xcode some of these steps may be a little tricky to follow. The only problem I've had with this setup is I can get the mpi executable to read input from within Xcode so either set it up to read the input from a file or you can do the final step of running it from the Terminal instead of trying to run it within Xcode. Where targetName is the name of the executable for your project. Then in the Arguments tab add something like the following to "Arguments Passed On Launch" Do this first and then after choosing other, select the orterun option as the executable (which is a symlink to mpirun). " which opens a Finder window and then drag the bin directory to the sidebar so you can access the directory within the open panel. An easy workaround is to use the bash Terminal and do "cd /usr/local/openmpi" followed by "open. This is a bit tricky as it won't easily let you do this. If you also want to run it from within Xcode, you need to edit the Scheme, select Run from the list on the left, choose Other and then navigate to where you installed OpenMPI (/usr/local/openmpi/bin). Probably, you’ll want to install these Python modules too: pip install scipy astropy jupyter pandas seaborn matplotlib. So that when you #include it can find the header file. Now you can use pip to install the prerequisite python modules for AMUSE: pip install -upgrade pip pip install numpy docutils mpi4py h5py wheel. You'll also want to go the Build Settings, find "Header Search Paths" and add /usr/local/openmpi/include In Xcode, select the project icon in the left sidebar, choose Info and then under Configurations specify your mpi.xcconfig file so it will use that compiler. xcconfig) to your project and choose "Configuration Settings File". Next add a new file named mpi (Xcode will add the extension. I downloaded openmpi-2.0.0 and installed it using: You can compile from within Xcode using the mpic++ compiler. > I found nothing I can use on my platform (Mac 10.12, Xcode 8.0). > I need help for installing this compiler on Xcod. > I succeed to install MPI (openmpi-1.6.5), so I can run simple test code from Terminal. > I need now to switch to MPI in order to run on massively parallel computers. > I have a multi-thread code working well on various Mac I have and SGI computer working with shared memory. I have exactly the same defect with gcc8 and gcc7.> On Nov 1, 2016, at 9:02 AM, Bernard Bernu wrote: :info:configure Command failed: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_macports_release_tarballs_ports_science_openmpi/openmpi-devel-gcc8/work/build" & /opt/local/var/macports/build/_opt_local_var_macports_sources_macports_release_tarballs_ports_science_openmpi/openmpi-devel-gcc8/work/openmpi-v4.0.x-201905080241-5d4c9b4/configure -prefix=/opt/local -enable-mpi-cxx FFLAGS='' F77='' -bindir=/opt/local/libexec/openmpi-devel-gcc8 -libdir=/opt/local/lib/openmpi-devel-gcc8 -sysconfdir=/opt/local/etc/openmpi-devel-gcc8 -includedir=/opt/local/include/openmpi-devel-gcc8 -datadir=/opt/local/share/openmpi-devel-gcc8 -docdir=/opt/local/share/docdelete -mandir=/opt/local/share/mandelete -with-hwloc=/opt/local -enable-mpi-fortran Sourcing these files will put the spack command in your PATH, set up your MODULEPATH to use Spack’s packages, and add other useful shell integration for certain commands, environments, and modules.For bash and zsh, it also sets up tab completion. :info:configure configure: error: ptrdiff_t type is not available, this is required by C99 standard. Sudo port install openmpi-devel-gcc9 +fortran MacPort 2.6.2, fresh install from scratch (all previous MacPort port and files removed as explained in)
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